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Role of enzymes in animals
Role of enzymes in medicine
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In the lab, Inhibiting the Action of Catechol Oxidase we had to investigate what type of enzyme inhibition occurs when an inhibitor is added. Catechol oxidase is an enzyme in plants that creates benzoquinone.Benzoquinone is a substance that is toxic to bacteria. It is brown and is the reason fruit turns brown. Now, there are two types of inhibitors, the competitive inhibitor and non-competitive inhibitor. For an enzyme reaction to occur a substrate has to bind or fit into the active site of the enzyme. In competitive inhibition there is a substrate and an inhibitor present, both compete to bind to the active site. If the competitive inhibitor binds to the active site it stops the reaction. A noncompetitive inhibitor binds to another region
of the enzyme and alters the shape of the active site which prohibits the substrate from binding to the active site. In this lab we utilized the inhibitor phenylthiourea (PTU) which is associated with copper, a cofactor in making catechol oxidase work. We were testing how phenylthiourea would affect the binding of copper and catechol. We hypothesize that when phenylthiourea combines with copper it will competitively inhibit catechol. We had to obtain data which allowed us to test our hypothesis of how phenylthiourea affects the binding of copper and catechol. In this lab we will be adding distilled water, potato extract, and catechol to three test tubes. We will also be adding the inhibitor phenylthiourea to two of the test tubes and mixing each tube when all the contents are added. If phenylthiourea competitively inhibits catechol, then adding more catechol will cause a reaction to occur. Materials and Methods In order to test whether phenylthiourea would affect the binding of copper and catechol we obtained three test tubes, distilled water, potato extract, phenylthiourea and catechol. In sequential order we added 5 mL of distilled water, 0.5 mL of potato extract, 0.5 mL of phenylthiourea, 0.5 mL of distilled water, and 0.5 mL of catechol to test tube number one. Note that we added the substrate catechol to the test tubes last because we did not want the reaction to occur while we were still adding the other solutions to the test tubes. We mixed test tube number one and proceeded to add the solutions to the following test tube. We added 5 mL of distilled water, 0.5 mL of potato extract, 0.5 mL of phenylthiourea, and 1 mL of catechol to test tube number two. The concentration of catechol was increased in test tube 2 because we were testing if adding more catechol would outcompete the competitive inhibitor phenylthiourea. After mixing test tube number two we moved onto test tube number three. We added 5 mL of distilled water, 5 mL of 0.5 potato extract, 1 mL of distilled water, and 0.5 mL of catechol to test tube number three. After we mixed test tube number three, we recorded our observations on a data table. The control in the experiment was test tube number three because we did not add the inhibitor phenylthiourea.
Data from Table 1. confirms the theory that as the concentration of glucose increases so will the absorbance of the solution when examined with the glucose oxidase/horseradish peroxidase assay. Glucose within the context of this assay is determined by the amount of ferricyanide, determined by absornace, which is produced in a one to one ratio.1 Furthermore when examining the glucose standards, a linear calibration curve was able to be produced (shown as Figure 1). Noted the R2 value of the y = 1.808x - 0.0125 trend line is 0.9958, which is statistically considered linear. From this calibration curve the absorbance values of unknowns samples can be compared, and the correlated glucose concentration can then be approximated.
Table 6 shows the results of the biochemical tests. The isolate can obtain its energy by means of aerobic respiration but not fermentation. In the Oxidation-Fermentation test, a yellow color change was produced only under both aerobic conditions, indicating that the EI can oxidize glucose to produce acidic products. In addition to glucose, the EI can also utilize lactose and sucrose, and this deduction is based on the fact that the color of the test medium broth changed to yellow in all three Phenol Red Broth tests. These results are further supported by the results of the Triple Sugar Iron Agar test. Although the EI does perform fermentation of these three carbohydrates, it appears that this bacterium cannot perform mixed acid fermentation nor 2,3-butanediol fermentation due to the lack of color change in Methyl Red and Vogues-Proskauer
In this experiment the enzyme peroxidase and the substrate hydrogen peroxide were not mixed initially, instead they were both placed in separate tubes and were incubated at a specific temperature, to prevent hydrogen peroxide from undergoing any reaction with peroxidase until they both acquire the required temperature.
Living organisms undergo chemical reactions with the help of unique proteins known as enzymes. Enzymes significantly assist in these processes by accelerating the rate of reaction in order to maintain life in the organism. Without enzymes, an organism would not be able to survive as long, because its chemical reactions would be too slow to prolong life. The properties and functions of enzymes during chemical reactions can help analyze the activity of the specific enzyme catalase, which can be found in bovine liver and yeast. Our hypothesis regarding enzyme activity is that the aspects of biology and environmental factors contribute to the different enzyme activities between bovine liver and yeast.
Catalase is a common enzyme that is produced in all living organisms. All living organisms are made up of cells and within the cells, enzymes function to increase the rate of chemical reactions. Enzymes function to create the same reactions using a lower amount of energy. The reactions of catalase play an important role to life, for example, it breaks down hydrogen peroxide into oxygen and water. Our group developed an experiment to test the rate of reaction of catalase in whole carrots and pinto beans with various concentrations of hydrogen peroxide. Almost all enzymes are proteins and proteins are made up of amino acids. The areas within an enzyme speed up the chemical reactions which are known as the active sites, and are also where the
The Effect of pH on the Activity of Catalase Planning Experimental Work Secondary Resources Catalase is a type of enzyme found in different types of foods such as potatoes, apples and livers. It speeds up the disintegration of hydrogen peroxide into water because of the molecule of hydrogen peroxide (H2O2) but it remains unchanged at the end of the reaction.
In this experiment, Borneol was oxidized to Camphor and later reduced to two possible diastereomers, in which isoborneol was favored, with the use of sodium hypochlorite and sodium borohydride. Hypochlorous acid served as the oxidizing agent and was vital in the formation of the ketone making up the bicyclic compound Camphor. Second most important, sodium borohydride provided the reducing agent, hydride, which added in on the endo side of the second carbon (C2) to make the exo alcohol isoborneol. The mechanisms of oxidation and reduction mirrored similar reactions such as esterification, β-elimination, and nucleophilic attack. The chirality and stereochemistry was observed in each step and played a role in forming the exo product isoborneol
The purpose of this experiment was to witness how enzymes act in different conditions for instance how enzymes would react in different temperatures or a different ph level.We found that any temperature which is not the standard for the enzyme will lower the productivity. For the first lab we represented our hands as catalysts and we were connecting pop beads blindley to record how effective we were, in the second trial we put on gloves to simulate how enzymes react in different temperatures, we found out enzymes are less productive in different temperatures. The second lab was more literal we used yeast as our enzyme and we put paper
Feedback inhibition is a reaction product is used to regulate its own further production. Cells have evolved to use feedback inhibition to regulate enzyme activity in metabolism, by using the products of the enzymatic reactions to inhibit further enzyme activity. Metabolic reactions, such as anabolic and catabolic processes, must proceed according to the demands of the cell. In order to maintain chemical equilibrium and meet the needs of the cell, some metabolic products inhibit the enzymes in the chemical pathway while some reactants activate them.
Enzyme assay analysis of succinate dehydrogenase to resolve Km and Vmax values and to determine the affects of different variables on the oxidation of succinate to fumerate
An enzyme can be defined as a protein that acts as a catalyst in a biological system. It increases the rate of reaction by decreasing the activation energy. The catalytic power and specificity of an enzyme can be altered by the binding of certain molecules. These molecules are referred to as inhibitors. An inhibitor works to prevent the formation, or to cause the breakdown of an enzyme-substrate compound. There are two categories of inhibitors. The first being irreversible inhibitors, and the second being reversible inhibitors. Irreversible inhibitors tend to be more tightly bound, covalently or noncovalently (mostly covalently), to the enzyme than reversible inhibitors, which tend to dissociate more rapidly from the enzyme. Reversible inhibitors can be subdivided into three groups: competitive, uncompetitive, and noncompetitive.
Enzymes have the ability to act on a small group of chemically similar substances. Enzymes are very specific, in the sense that each enzyme is limited to interact with only one set of reactants; the reactants are referred to as substrates. Substrates of an enzyme are the chemicals altered by enzyme-catalysed reactions. The extreme specific nature of enzymes are because of the complicated three-dimensional shape, which is due to the particular way the amino acid chain of proteins folds.
Mitochondria originally existed as a single celled organism, but were then engulfed by a eukaryotic cell. Thereafter, these organisms displayed an endosymbiosis relationship. Mitochondrial DNA is inherited from the maternal parent. Due to this fact, mtDNA is a useful molecule for studying point mutations, because there is no crossing over in mtDNA. Furthermore, the point of this lab was to analyze how mtDNA changes over time and from the changes in the mtDNA determine material linage and haplogroup. In this experiment, the hyper variable region I was analyzed to determine the haplogroup and the haplotype of a specific individual. Mitochondrial DNA was extracted, amplified, purified, and then ran through a gel. The 1% agarose gel displayed that
In this experiment increasing amounts of Catechol and L.Dopa where used to determine the rate of enzyme catalysis of PPO. Also an inhibitor, PTU was analyzed with the substrate, Catechol and the enyme PPO. The results were then plotted using a Michaelis-Menten plot and PPO’s affinity (Km) for a particular substrate was determined. The PTU results were also plotted on a Michaelis-Menten plot to see whether or not PTU was a competitive or non-competitive inhibitor. A constant amount of PPO extract from potatoes and Phosphate buffer was used in each of the experiments with varying amounts of DI water
The purpose of this study was to isolate, characterize, and identify an unknown species of bacteria collected from soil in Flagstaff, Arizona. The environmental isolate (EI) was found to be non-motile, this limits the bacteria from spreading across an area without outside forces. The EI had a positive reaction to the catalase test this indicates that the bacteria can convert harmful hydrogen peroxide into water and free oxygen (Shand and Fitchett 2017). It was also discovered that the EI was a strict aerobe which is significant because it cannot live without oxygen. This limits the area the bacteria can survive in. It was discovered that the EI was predominantly arranged in clusters and had the ability to produce a biofilm. This