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Enzymes and their importance
Effect of substrate concentration on enzyme action
Importance of enzymes in our life
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The practical was carried out to investigate the effect of pH on the reaction of the enzyme acid phosphatase.
Of the many functions of proteins, catalysis is by far the most vital. When catalysis is not present, most reactions in the biological systems take place very slowly to produce at an adequate pace for metabolising organism. The catalysts that take this role are called enzymes. Enzymes are the most efficient catalysts; they can enhance rate of reaction by up to 1020 over uncatalysed reactions. (Campbell et al, 2012).
Enzyme catalysis is dependant upon factors such as concentration of enzyme and substrate, temperature and pH. These factors determine the rate of reaction, and an increase in temperature or pH above the optimum will lead to the denaturation of the enzyme and a decrease in the rate of reaction. There are many phosphatase enzymes but they are classified as those with alkaline and acid pH optimum. Both catalyse general reaction: ROPO3H2+ H2O –ROH + HPO42-+2H+.
Each enzymes works with a small range of pH, there is a pH at which its activity is greatest called optimal pH. This is due to the changes in pH can make a break intra and intermolecular bonds, distorting the shape of the enzyme, and its effectiveness. Generally, enzymes have an optimum pH this doesn’t go to say that the optimum is the same for each enzyme. For example the optimum pH for enzyme pepsin found acidic lumen in the stomach is lower than that of the enzyme carbonic anhydrase that works in the cytosol at neural pH.
Predominantly, enzymes show specificity for phosphatase monoesters but are relatively non-specific to (RO-). This can be used to construct an assay that uses non-physiological substrate, p-nitrophenyl phosphate, and one that has a p...
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...testing) would enable a clear distinction in determining the variation in the data. However, the mean can show a simple interpretation of a distorted view of distribution on occasions (outliers). Standard Deviation gives the right picture, smaller the standard deviation higher the central tendency and data is concentrated around the mean. Higher value of standard deviation indicates better distribution of data. Thus, a specific read on the optimum pH can be identified.
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References
Campbell, M.K., Shawn, S.O. (2012). Biochemistry, 7th Edition. The Behaviour of Proteins: Enzymes. Pg 139-159.
Van Etten, R.L. and Waymack, P.P. (1991). Substrate specificity and pH dependence of homogeneous wheat germ acid phosphatase. Archives of Biochemistry and Biophysics 288, 634.
Walsh, C. (1979) Enzymatic Reaction Mechanisms, W.H. Freeman, San Francisco.
Living organisms undergo chemical reactions with the help of unique proteins known as enzymes. Enzymes significantly assist in these processes by accelerating the rate of reaction in order to maintain life in the organism. Without enzymes, an organism would not be able to survive as long, because its chemical reactions would be too slow to prolong life. The properties and functions of enzymes during chemical reactions can help analyze the activity of the specific enzyme catalase, which can be found in bovine liver and yeast. Our hypothesis regarding enzyme activity is that the aspects of biology and environmental factors contribute to the different enzyme activities between bovine liver and yeast.
Catalase is a common enzyme that is produced in all living organisms. All living organisms are made up of cells and within the cells, enzymes function to increase the rate of chemical reactions. Enzymes function to create the same reactions using a lower amount of energy. The reactions of catalase play an important role to life, for example, it breaks down hydrogen peroxide into oxygen and water. Our group developed an experiment to test the rate of reaction of catalase in whole carrots and pinto beans with various concentrations of hydrogen peroxide. Almost all enzymes are proteins and proteins are made up of amino acids. The areas within an enzyme speed up the chemical reactions which are known as the active sites, and are also where the
The control for both curves was the beaker with 0% concentration of substrate, which produced no enzyme activity, as there were no substrate molecules for...
Finally, the last part of the experiment examined the enzyme activity at different pH levels. Four sets of 11 tubes were set up in this part. The procedure for this part is the same as before, but 4 other buffers were substituted for the standard pH 7.3 phosphate buffer. Set A used the 5.5 pH buffer while set B used the 6.5 pH buffer. The buffer of pH 8.5 was used for set B and for set D the pH was 9. The absorbance readings for 4 sets were taken and recorded in table 13. Using the linear equation that the best-fit line gave for each set, the Km and the Vmax of each set were determined. Then, table 15 was made by dividing the Vmax by the Km. of the four pHs. The Vmax and Km of the control set were also used to make
Peroxidase activity’s optimum pH was found to be pH 5, since the absorbance rate was the highest at 0.3493. Little activity occurred at pH 3, but the absorbance of the reaction with pH 7 rose steadily to 0.99. The rate of absorbance for peroxidase with pH 9 was 0.0097; pH 9 is incapable of accelerating enzyme activity. This suggests that an alkaline pH is inferior to an acidic pH in increasing peroxidase activity, and that the higher the pH level, the poorer the pH boosts the reaction. A highly acidic pH also reduces
The Effect of pH on the Activity of Catalase Planning Experimental Work Secondary Resources Catalase is a type of enzyme found in different types of foods such as potatoes, apples and livers. It speeds up the disintegration of hydrogen peroxide into water because of the molecule of hydrogen peroxide (H2O2) but it remains unchanged at the end of the reaction.
Jim Clark. (2007). The effect of changing conditions in enzyme catalysis. Retrieved on March 6, 2001, from http://www.chemguide.co.uk/organicprops/aminoacids/enzymes2.html
Background information:. Enzyme Enzymes are protein molecules that act as the biological catalysts. A Catalyst is a molecule which can speed up chemical reactions but remains unchanged at the end of the reaction. Enzymes catalyze most of the metabolic reactions that take place within a living organism. They speed up the metabolic reactions by lowering the amount of energy.
I decided to experiment with pHs within the range pH 2 to pH7, as I
Proteins are one of the main building blocks of the body. They are required for the structure, function, and regulation of the body’s tissues and organs. Even smaller units create proteins; these are called amino acids. There are twenty different types of amino acids, and all twenty are configured in many different chains and sequences, producing differing protein structures and functions. An enzyme is a specialized protein that participates in chemical reactions where they serve as catalysts to speed up said reactions, or reduce the energy of activation, noted as Ea (Mader & Windelspecht).
The [ES] complex can then undergo two different pathways; the complex can dissociate to [E] and [S], at a rate of k or it can shift equilibrium to the left with a rate constant of k2 to form [E] and product [P]1. In this model, the breakdown of the ES complex to yield P is the overall rate-limiting step. Three assumptions of a Michaelis-Menton plot are that a specific [ES] complex in rapid equilibrium between [E] and [S] is a necessary intermediate, the amount of substrate is more than the amount of enzyme so the [S] remains constant, and that this plot follows steady state assumptions. Steady state assumptions states that the intermediate stays the same concentration even if the starting materials and products are constantly changing.2 The rapid equilibrium between enzyme and substrate, and the enzyme-substrate complex yields a mathematical description regarded as the Michaelis-Menton
Many factors, for example, pH and temperature affects the way enzymes work by either increasing the rate or determining the type of product produced (). The report, therefore, analyses the effects of the enzyme peroxidase in metabolic reactions and determining its optimum temperature in the reactions.
...e substances at 37.5̊C due to the fact that in the previous experiment, this was found to be the optimum temperature that catalase reacts at. It was because of this constant that I used the set of data of the catalase at 37.5̊C from the first experiment to provide a neutral environment for the experiment. The way in which the data was collected for the first experiment was identical to that needed to be done by the second. From this data, it was determined that the neutral environment for the catalase had the best results, which makes it clear that when the enzyme is in a pH of the opposite extremes such as basic or acidic, it is un able to function properly. When it is too basic then the enzyme will become inactive and when the enzyme is too acidic then the enzyme will denature, both rendering it unable to function at its optimum efficiency that all enzymes need.
Enzymes as mentioned before help speed up reactions, they generally work by bonding to a substrate, this bonding occurs at the active site. This link then forms a different molecule which will benefit its respective process. Every enzyme has its own optimum pH level to work under, if too low the enzyme will be very slow. However if too high the enzyme will then denature and be obsolete. This is why it is important to know the optimum pH level for whatev...
From looking at the results I can conclude that when the pH was 3 and