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Biology lab enzyme activity
Biology lab enzyme activity
Biology lab enzyme activity
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Recommended: Biology lab enzyme activity
Because it’s very difficult to accurately measure lactose or glucose in solution, we use a false substrate (known as analog) for the enzyme known as ONPG (ortho-nitro-phenyl-galactoside). ONPG has a structure similar to lactose, so it can bind to the enzyme and be cleaved. The products are galactose and ortho-nitrophenolate. ortho-nitrophenolate is yellow in color and can be measured by spectrophotometry. the rate of an enzyme can be measured. The reaction is usually expressed like this E is the enzyme, S is the substrate, ES is the complex of the two and P is the product. Each step 1) formation of ES and 2) formation of product goes forward, as well as backwards. The backwards direction increases over time (as the reaction approaches equilibrium). …show more content…
In order to make that correlation, you would need to measure a series of known dilutions of ortho-nitrophenolate, measure them with the spectrophotometer. the standard curve plotted Absorbance versus concentration for known amounts of ortho-nitrophenolate will be drawn. This will be useful in determining the rate of reaction for the Lactase enzyme in different conditions (amount of product/time = rate). D ifferent concentrations of different concentrations of ONPG is needed. At this point the amount of lactase activity in your stock is unknown, so it would be good to determine a proper concentration of lactase to, therefore a series of dilutions of this first stock will be made and tested. Make a set of 4 serial 1:10 dilutions and label them as 1:10; 1:100; 1:1,000 and 1:10,000. This will give you a set of stock enzyme solutions of different concentrations. After the working concentration of Lactase has been found, the two main measurements of enzyme kinetics need to be calculated: Vmax (maximum rate of reaction for this enzyme and this substrate under these conditions) and Km (the Michaelis constant, the concentration of substrate that gives one half Vmax – it’s an indirect measure of the affinity of the enzyme for the
Data from Table 1. confirms the theory that as the concentration of glucose increases so will the absorbance of the solution when examined with the glucose oxidase/horseradish peroxidase assay. Glucose within the context of this assay is determined by the amount of ferricyanide, determined by absornace, which is produced in a one to one ratio.1 Furthermore when examining the glucose standards, a linear calibration curve was able to be produced (shown as Figure 1). Noted the R2 value of the y = 1.808x - 0.0125 trend line is 0.9958, which is statistically considered linear. From this calibration curve the absorbance values of unknowns samples can be compared, and the correlated glucose concentration can then be approximated.
Therefore, it is expected that the methyl meta-nitrobenzoate would be the product formed faster and in greater quantities because it has the more stable intermediate. Thin layer chromatography uses a solvent (in this case 85% hexane–15% ethyl acetate) to separate different products based on differences in polarity of the molecules. Typically more polar compounds will have more interaction with the stationary phase, and will not move as from the solvent front. This means that the less polar a substance is, the farther it will move. Using the mechanism of electrophilic benzylic substitution, it can be determined at where each step of the mechanism is occurring, and at what procedure it is occurring at.
The purpose of this study is to analyze the activity of the enzyme, catalase, through our understanding
These labels indicated the lactose solution that was be placed into the mini-microfuge tubes. The varying lactose ph solutions were obtained. The four miniature pipets were then used, (one per solution,) to add 1mL of the solution to the corresponding mini-microfuge tubes. When this step is completed there were two mini-microfuge tubes that matched the paper towel. Then, once all of the solutions contained their respective lactose solutions, 0.5mL of the lactase enzyme suspension was added to the first mini-microfuge tube labeled LPH4 on the paper towel, and 4 on the microfuge tube. As soon as the lactase enzyme suspension was added to the mini-microfuge tube, the timer was started in stopwatch mode (increasing.) When the timer reached 7 minutes and 30 seconds, the glucose test strip was dipped into the created solution in the mini-microfuge tube for 2 seconds (keep timer going, as the timer is also needed for the glucose strip. Once the two seconds had elapsed, the test strip was immediately removed, and the excess solution was wiped gently on the side of the mini-microfuge tube. The timer was continued for 30 addition seconds. Once the timer reached 7:32 (the extra two seconds accounting for the glucose dip), the test strip was then compared the glucose test strip color chart that is found on the side of the glucose test strip
For example, incubating the samples at different temperatures would create more data points to establish an optimal temperature. From the results in the experiment in this study, it is known as temperature increases, enzymatic activity increase, and vise versa. However, what can not be observed is at what point does the increase in temperature begin to denature the enzyme, above 60°C. Furthermore, assays can be preformed to determine optimal pH, as well. From Dutta’s, and his partners, experiment it shows that there is a range where the Heliodiaptomus viduus’s lactase shows the most activity, which is between 5.0 and 6.0
Varying Concentration of Rennin and Its Effect on the Goagulation Time of Milk Scientific Knowledge Enzymes Enzymes are large molecules, which are protein in nature. They are biological catalysts that speed up chemical reactions in the body. They operate by a "lock and key" method. The Enzyme has a certain "lock" (active site) that only a specified substrates "key" will fit into.
Mader, S. S. (2010). Metabolism: Energy and Enzymes. In K. G. Lyle-Ippolito, & A. T. Storfer (Ed.), Inquiry into life (13th ed., pp. 105-107). Princeton, N.J: McGraw Hill.
Purpose: The purpose of this lab is to explore the different factors which effect enzyme activity and the rates of reaction, such as particle size and temperature.
The independent variable for this experiment is the enzyme concentration, and the range chosen is from 1% to 5% with the measurements of 1, 2, 4, and 5%. The dependant variable to be measured is the absorbance of the absorbance of the solution within a colorimeter, Equipments: Iodine solution: used to test for present of starch - Amylase solution - 1% starch solution - 1 pipette - 3 syringes - 8 test tubes – Stop clock - Water bath at 37oc - Distilled water- colorimeter Method: = == ==
That means the active site and the substrate should be exactly complementary so that the substrate can fit in perfectly. Once they collide, the substrate and. some of the side-chains of the enzyme’s amino acids form a temporary. bond so that the substrate can be held in the active site. They combine to form an enzyme-substrate complex and the enzyme can start.
Alkaline Phosphatase (APase) is an important enzyme in pre-diagnostic treatments making it an intensely studied enzyme. In order to fully understand the biochemical properties of enzymes, a kinetic explanation is essential. The kinetic assessment allows for a mechanism on how the enzyme functions. The experiment performed outlines the kinetic assessment for the purification of APase, which was purified in latter experiments through the lysis of E.coli’s bacterial cell wall. This kinetic experiment exploits the catalytic process of APase; APase catalyzes a hydrolysis reaction to produce an inorganic phosphate and alcohol via an intermediate complex.1 Using the Michaelis-Menton model for kinetic characteristics, the kinetic values of APase were found by evaluating the enzymatic rate using a paranitrophenyl phosphate (PNPP) substrate. This model uses an equation to describe enzymatic rates, by relating the
an enzyme is used to speed up the process in the equation above. In my
Sequence of events when the union of a substrate with its enzyme occurs. Preliminary Work: Preliminary work was carried out to find a suitable range to collect data in a way that is appropriate. From the preliminary work I was able to determine suitable intervals of time to collect data. It showed that a volume of amylase below 4cm3 took a very long time to react thus making the experiment takes too long to do. From this I worked out that I should start.
The 'lock and key' hypothesis explains how enzymes only work with a specific substrate. The hypothesis presents the enzyme as the 'lock, and the specific substrate as 'key'. The active site binds the substrate, forms a product, which is then released. Diagram 1- a diagram showing the 'lock and key' mechanism works
Two spot plates were placed on a napkin that has Temperature 0˚, 25˚, 35˚, 50˚, 65˚, 90˚ Celsius. Three groups tested fungal amylase which is Alpha-amylase Aspergillus Oryzae and two groups tested mammal amylase which is Alpha-amylase from Porcine pancreas. Six test tubes were labeled with different temperature and enzyme source Mammal or Fungal Amylase. Add 2.5mL of 1% starch was added to each test tube. Afterwards, each test tube was placed into its respective temperatures. Another Six test tubes were obtained and were labeled with different temperatures and enzyme source Mammal or Fungal Amylase. Add 1ml of amylase Mammal or Fungal in each test tube and placed into its respective temperature. The test tubes were allowed to equilibrate for five minutes in their temperatures. After the calibration process, few drops of each solution were transferred from each test tube without removing the test tubes from their temperatures. These drops were added into the first row of wells on the spot plate, then add two drops of iodine to the wells on the spot plate and wait 1 minute. Use a color- coding scheme to convert the data to qualitative data into quantitative data this will serve as the control. Add 0.5 ml of amylase to the appropriate test tube containing starch and wait two minutes. Then add two drops of the starch-amylase mixture from each tube to the third row of